Insertion junction: CLIP2.068388_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.068388
Chromosome:chromosome 6
Location:8010450
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g304750 (1 of 2) K12486 - stromal membrane-associated protein (SMAP) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCGAACTGGGGATGCGGATGCGTGGGATAACTACCCTAGGCAGTTTTA
Internal bar code:CATTGCGGTGTTGATCAATACG

Confirmation - LEAP-Seq

LEAP-Seq distance:3215
LEAP-Seq percent confirming:67.7419
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:TCTTGAGGACGGTGTTGTCG
Suggested primer 2:CGTGCCCAACTTGTTGTGAG