Insertion junction: CLIP2.068392_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.068392
Chromosome:mitogenome
Location:8451
Confidence (%):80
Locus systematic id Locus common name Defline Feature
CreMt.g802342 nad6,801500,ChrepMp06 (1 of 1) K03884 - NADH-ubiquinone oxidoreductase chain 6 (ND6); NADH dehydrogenase subunit 6 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTTTCTTTAGAGGTGTAGCTTAGTTGGTTAAAGCGCAAGATTCCAAATC
Internal bar code:AAACCCTGGAGGACTGAATTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:4186
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:144
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:144

Suggested primers for confirmation by PCR

Suggested primer 1:GGTTTCACCGAGTCCCCAAT
Suggested primer 2:GCTTTGTGCGCTGTTAGCTT