Insertion junction: CLIP2.068397_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.068397
Chromosome:chromosome 6
Location:6262868
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g292350 AOC4 (1 of 1) PTHR11785//PTHR11785:SF355 - AMINO ACID TRANSPORTER // SUBFAMILY NOT NAMED; Amino acid carrier intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCCTTGCGTTGTTTGTGCATGTGCTTGTGTGTGTGTGTGTGTGTGTGT
Internal bar code:GGGTGCACGCTCGTACGCATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:478
LEAP-Seq percent confirming:14.2857
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCTCGTTTTCGTTGGTTT
Suggested primer 2:CCGCTCGTTTTCGTTGGTTT