Insertion junction: CLIP2.068398_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.068398
Chromosome:chromosome 2
Location:2574247
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g092750 RRM3,SSA18 Putative ribosomal RNA methyltransferase; (1 of 1) 2.1.1.296//2.1.1.57 - Methyltransferase cap2 / mRNA (nucleoside-2'-O)-methyltransferase // Methyltransferase cap1 / mRNA (nucleoside-2'-O)-methyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTCTGAGATTCGCAGAAGACATTTTAGGGCGTTTCGGGCCCAAGGCAA
Internal bar code:AGGGATGCACACAATGGTCGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:4358
LEAP-Seq percent confirming:82.0513
LEAP-Seq n confirming:96
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:117

Suggested primers for confirmation by PCR

Suggested primer 1:GCCAGTGTATTCGGCGGATA
Suggested primer 2:AAGCGGCGTAGACCTATTCG