Insertion junction: CLIP2.068399_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.068399
Chromosome:chromosome 17
Location:2447452
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g715050 RAB28 Small Rab-related GTPase; (1 of 1) IPR001806//IPR003579//IPR020849//IPR027417 - Small GTPase superfamily // Small GTPase superfamily, Rab type // Small GTPase superfamily, Ras type // P-loop containing nucleoside triphosphate hydrolase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCAGGATGGTGGCTGGGCCGTGGCACGCGGCGATGGCGGTAGAGCCGC
Internal bar code:TGTGAATCATTGCGGCATCACC

Confirmation - LEAP-Seq

LEAP-Seq distance:1468
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:GGTAGTCATACTCACCCGCG
Suggested primer 2:GCTTGTGTGCACACTACAGC