Insertion junction: CLIP2.068407_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.068407
Chromosome:chromosome 3
Location:4969722
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre03.g179300 SRH6 (1 of 1) K11367 - chromodomain-helicase-DNA-binding protein 1 [EC:3.6.4.12] (CHD1); SNF2-related DNA/RNA helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGATGTGTGTGGGAACGCAGACGACGCCGGCAGGCTGCAGCTCAATGTGT
Internal bar code:CAACTGAAACGTACGGTCCTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:506
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGCGAAAGACCCGTGCTA
Suggested primer 2:GCCAAGGTATCGTATGCGGA