Insertion junction: CLIP2.068408_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.068408
Chromosome:chromosome 5
Location:1972367
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g236250 Conserved WD40-repeat Protein; (1 of 2) PTHR22847//PTHR22847:SF459 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGATAGCAGTAGTATAGTGTAAGGCAAGCAATTCCGCTGGTCGCCACT
Internal bar code:GGGGTAAATTGTAAGCGCACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:456
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGCTTGGTGAATGTGGTA
Suggested primer 2:CGCGCACTACGTTACACATG