Insertion junction: CLIP2.068411_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.068411
Chromosome:chromosome 6
Location:3148961
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g275800 HTB31,HTB4,HTB3 (1 of 27) K11252 - histone H2B (H2B); Histone H2B 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCGCCCTGTCCCAAGCCCCCAAACCCCCGCGTCATGGTGGTGTTGAGA
Internal bar code:GTTTTGAGCCTTGTTGAGACCG

Confirmation - LEAP-Seq

LEAP-Seq distance:3690
LEAP-Seq percent confirming:98.8095
LEAP-Seq n confirming:83
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:84

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCATTCTCTTTCAGAGCG
Suggested primer 2:CGGTTAAGAGGGGTTGGCAT