Insertion junction: CLIP2.068415_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.068415
Chromosome:chromosome 2
Location:6524996
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g389000 (1 of 1) PTHR23012:SF61 - AT07234P-RELATED 3'UTR
Cre09.g389050 CNX5,MAW4 (1 of 2) PTHR16861//PTHR16861:SF4 - GLYCOPROTEIN 38 // PODOPLANIN; Membrane-associated hydroxyproline-rich glycoprotein 4 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGTACGACATCAACCACAGCCGCACCTCCGTTGTTCCGCTCCATCCAG
Internal bar code:TAGTTACTCTATGCAAGTATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1286
LEAP-Seq percent confirming:89.4737
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGTTGACGTAGGGAGCTA
Suggested primer 2:GACTTGAGCGGGACTGTTGA