Insertion junction: CLIP2.068415_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.068415
Chromosome:chromosome 2
Location:6524999
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g389000 (1 of 1) PTHR23012:SF61 - AT07234P-RELATED 3'UTR
Cre09.g389050 CNX5,MAW4 (1 of 2) PTHR16861//PTHR16861:SF4 - GLYCOPROTEIN 38 // PODOPLANIN; Membrane-associated hydroxyproline-rich glycoprotein 4 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGGTTGCAAGGCAAGCGATGAAGGGCACGCTTGCAAGTGCCGCACGAG
Internal bar code:TAACTAATTGCAGCTGCGATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1096
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GACTTGAGCGGGACTGTTGA
Suggested primer 2:TCCGTTGACGTAGGGAGCTA