Insertion junction: CLIP2.068420_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.068420
Chromosome:chromosome 1
Location:4759689
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g033000 FAP334 (1 of 2) IPR000157//IPR016024 - Toll/interleukin-1 receptor homology (TIR) domain // Armadillo-type fold; Flagellar Associated Protein 334 5'UTR
Cre01.g800090 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAAGTAGATACTCAACCTTTGCAAAATGCTAAGAGCCATGAAATTGTGA
Internal bar code:TAGCACATATTACTCTATCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1417
LEAP-Seq percent confirming:96.6667
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:TCACCCTGCACCCAAAACTT
Suggested primer 2:GCCCCAGGCTTGCAATATTG