Insertion junction: CLIP2.068426_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.068426
Chromosome:chromosome 7
Location:1535092
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g324500 MMP22 Matrix metalloproteinase; (1 of 40) 3.4.24.38 - Gametolysin / Lysin 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAAATGGTGGTTGATGCGGATTGTCTCTGTTGTGTCTCATGAAGAGGCC
Internal bar code:GGTTAAATGGGGGGGCAGGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1143
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TTGAGACTTGACTCGGGCAC
Suggested primer 2:ACGCTGCTGCATTGTTTCTG