Insertion junction: CLIP2.068428_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.068428
Chromosome:chromosome 6
Location:8071615
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g305250 (1 of 90) PF03372 - Endonuclease/Exonuclease/phosphatase family (Exo_endo_phos) 3'UTR
Cre06.g305251 (1 of 1) IPR001680//IPR011045//IPR017986 - WD40 repeat // Nitrous oxide reductase, N-terminal // WD40-repeat-containing domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGTCATGTATCTGTTTCAAAGTCGTCGGCGTAGGGGAATGCGGCCCTCC
Internal bar code:TCTTGATGGCAGTCAATGGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:4003
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:72
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:CCAACACACCTTCTTGCGTG
Suggested primer 2:GTACTTCTCCTGCCGCTTGT