Insertion junction: CLIP2.068435_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.068435
Chromosome:chromosome 3
Location:7939634
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g202250 (1 of 1) PTHR17598:SF13 - DNA POLYMERASE DELTA SUBUNIT 3 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGGGACATGGTTATAAAGCGGGCTTTTAGCTGCAACCCACGTGGCTGG
Internal bar code:GGCGAATATTGTCGAGTACAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1062
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:ATCAAGGCCATGATGCACCA
Suggested primer 2:GCGCTCTCATCTTCGTCGTA