Insertion junction: CLIP2.068439_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.068439
Chromosome:chromosome 7
Location:2704372
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g331050 (1 of 1) IPR000104//IPR001487 - Antifreeze protein, type I // Bromodomain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCGCTGGTAGTGCAGGCTTTGGAAGAGCATCCCGGCATTGGCTACCGG
Internal bar code:AAAAAAGTTATGACCGTATATG

Confirmation - LEAP-Seq

LEAP-Seq distance:922
LEAP-Seq percent confirming:96.9697
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCGACCATCAAGAACCCG
Suggested primer 2:CAGTTGCTGTGTCCAGGGAT