Insertion junction: CLIP2.068455_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.068455
Chromosome:chromosome 8
Location:4427658
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g385400 (1 of 3) 3.5.1.1 - Asparaginase / L-asparagine amidohydrolase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTCGCCGGATTGTCTCTTGAGCTGGTCCAGCAACGTGCGCACGGAGCT
Internal bar code:TCAACTGGTCCCATATACGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:580
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GTCACCAGCACGAAACACAC
Suggested primer 2:GCAGCGTTGCCTATCGAAAG