Insertion junction: CLIP2.068478_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.068478
Chromosome:chromosome 2
Location:1629698
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g085150 (1 of 19) PTHR31251:SF1 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGGTGAAGATAGGGCGGGGGGCATTCAATGGTACTGCCGGACAAGGGC
Internal bar code:TTTATCTCGCGTAGGTTCTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:5952
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:93
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:93

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTTACTAAACGCGGCCT
Suggested primer 2:CTATCGGTGCAAGCTCGCTA