Insertion junction: CLIP2.068481_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.068481
Chromosome:chromosome 6
Location:6303652
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g292800 UBC17 E2 Ubiquitin conjugating enzyme; (1 of 2) K06689 - ubiquitin-conjugating enzyme E2 D/E (UBE2D_E, UBC4, UBC5) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGTATGGGCGTCAGCTGCACCCTACGGGACCTCGCCAACCTGCCTAAA
Internal bar code:CATTCAGTATCTGTGTTGCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4014
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCAAAGGAGCTGTAGCAG
Suggested primer 2:CAAGCCAGGACAAGCAACAC