Insertion junction: CLIP2.068484_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.068484
Chromosome:plastome
Location:101517
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802307 psbF,2716994,ChreCp043 photosystem II reaction center subunit VI; (1 of 1) K02708 - photosystem II cytochrome b559 subunit beta (psbF) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACTCCATGCTTTGCCTAGATATTTATATTAGGATTTTAATACTCCCATG
Internal bar code:GGTCTCATATAAAGGCTGTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:120
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:TTACTTAGGACGGCAGTGGC
Suggested primer 2:CAATTTCCACCTTGTGCGTGA