Insertion junction: CLIP2.068486_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.068486
Chromosome:chromosome 10
Location:4726487
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre10.g452450 TIC110 Chloroplast envelope protein; (1 of 1) PF16940 - Chloroplast envelope transporter (Tic110) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGGTGGGGGTTGCAAAGATGGTTAAGGAAGCGGTACGGGATGCACTG
Internal bar code:AAACCCGCGACCGGTACGACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:533
LEAP-Seq percent confirming:22.8571
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGTGAGAGAGGACGTGG
Suggested primer 2:TGCTCCCTTCCACCTTACCT