Insertion junction: CLIP2.068487_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.068487
Chromosome:chromosome 12
Location:4549833
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g521350 SLY1 (1 of 1) PTHR11679:SF2 - SEC1 FAMILY DOMAIN-CONTAINING PROTEIN 1; SM/Sec1-family protein, SLY1 homolog 5'UTR
Cre12.g521400 (1 of 1) 6.3.5.11 - Cobyrinate a,c-diamide synthase (glutamine-hydrolyzing) / Cobyrinic acid a,c-diamide synthetase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCAACGTTGGAAAATAAAGCAAGTAGATTGCGCAATATCCAGACTTAT
Internal bar code:GACCGAACGCTCTTTGTGACCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1069
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTCGCAACCTACACCTAC
Suggested primer 2:ACCTCTCCACCTGATACCCC