Insertion junction: CLIP2.068500_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.068500
Chromosome:chromosome 12
Location:9559914
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g539900 (1 of 1) K00166 - 2-oxoisovalerate dehydrogenase E1 component alpha subunit (BCKDHA, bkdA1) 5'UTR
Cre12.g540051 TMEM70 (1 of 1) PTHR13281:SF0 - TRANSMEMBRANE PROTEIN 70, MITOCHONDRIAL; Transmembrane protein 70, mitochondrial 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCCCTTCGTGCCCACCGGCCTATAGCGCAGAACCGCCCCCCCCCCACC
Internal bar code:ACCGCGACCAACGCGCAAGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1344
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGGGCTACAAGGACAAGG
Suggested primer 2:AGCTGTGTCTCTGTCTTGCC