Insertion junction: CLIP2.068504_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.068504
Chromosome:chromosome 6
Location:5489967
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g286350 UMM6 UbiE/COQ5 methyltransferase family protein; (1 of 2) PTHR10108//PTHR10108:SF830 - METHYLTRANSFERASE // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGACAAAATGCATGTCTGCAAGTCCGCGGCGTCGAGGAAAGGAGAGTGAG
Internal bar code:GTAAGGGCAAGCTTATTGCTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:935
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTTCATCACTGCCAGAGT
Suggested primer 2:CCTGTGCTCTGTGTTTGTGC