Insertion junction: CLIP2.068507_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.068507
Chromosome:chromosome 1
Location:5047839
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g035050 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTCCCGAGGCCTCGGAGGCAGTGTTTTTGTTCGGTTGTTGTCTGTGAA
Internal bar code:TAATTAGTTTGCACAAACATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2906
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GTGAGAGTGTCCCCAACCAG
Suggested primer 2:CATCTGGGTCAGGAGCGATC