Insertion junction: CLIP2.068517_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.068517
Chromosome:chromosome 7
Location:6362258
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g357350 GLB1,PII Nitrogen regulatory protein PII; (1 of 1) PTHR30115:SF11 - NITROGEN REGULATORY PROTEIN P-II HOMOLOG 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCTTGCACAGCCCTGTAATACTGAGCTTCGATGCGGAAGCGGGCTACC
Internal bar code:TTCAGCCACTGGCCCTCGCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:660
LEAP-Seq percent confirming:42.8571
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCGAGTGTATGCCGATGA
Suggested primer 2:GGCTTGAGCTAGAGGTGGAC