Insertion junction: CLIP2.068519_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.068519
Chromosome:chromosome 1
Location:4781106
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g033150 (1 of 2) PTHR31385//PTHR31385:SF1 - FAMILY NOT NAMED // EXPRESSED PROTEIN-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCCCTGTGGCCGCAACGGCCCGCGGTTGCGTGCGTCTGCGTCTGCAGG
Internal bar code:ACCAGCAAAACATTTGATTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2022
LEAP-Seq percent confirming:93.9394
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GCACAGCAATCTAGCATGCC
Suggested primer 2:TCCCGCCCACACATATATGC