Insertion junction: CLIP2.068529_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.068529
Chromosome:chromosome 6
Location:56681
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g249050 (1 of 1) PTHR10641//PTHR10641:SF527 - MYB-LIKE DNA-BINDING PROTEIN MYB // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACTCCATAGACAATGGACTGTCGCGAGGTTGCAAGTAAAGGGCCCGAGG
Internal bar code:GGCGTGGCGACCAGGTGGCGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:3111
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCAGGCGTACCAAGTGAT
Suggested primer 2:CACATGCACTTTTCGGGCAA