Insertion junction: CLIP2.068534_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.068534
Chromosome:chromosome 1
Location:5946399
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g042300 SRR6 (1 of 1) IPR001190//IPR009003//IPR017448 - SRCR domain // Peptidase S1, PA clan // SRCR-like domain; Scavenger receptor cysteine rich (SRCR) protein outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCATCTAAATCCTTCATTCTTGACTCCAATACGATGTACTTGTGAGGG
Internal bar code:GGTCCGCCCACTGGAAACTGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:691
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TCTTTTGACGTCGATGGCGA
Suggested primer 2:CATCGTGCTGTAATGGCGTG