Insertion junction: CLIP2.068539_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.068539
Chromosome:chromosome 9
Location:217163
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g386746 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGGCCGAGTTTTGGCTCGAGAAAGTAGAGGTTCACAGATACAAGGATA
Internal bar code:CTGTCCAACCACCCTTGAACTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1287
LEAP-Seq percent confirming:1.08696
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:91
LEAP-Seq n unique pos:92

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCAACCCTGTCATCGCTC
Suggested primer 2:ATTTGCACACACGCTTCACC