Insertion junction: CLIP2.068543_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.068543
Chromosome:chromosome 12
Location:9871000
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g544327 (1 of 37) PF13639 - Ring finger domain (zf-RING_2) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTGATAGTTGCTGCGCGCGAGCCCGCAGTGCTTCGCCTTCAAAGAGGA
Internal bar code:TAGCTAACAAGTTTCTCGTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3555
LEAP-Seq percent confirming:58.5366
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGCGAAAACCACGGAATC
Suggested primer 2:GCAAGCGCTATCACAGTTGG