Insertion junction: CLIP2.068546_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.068546
Chromosome:chromosome 2
Location:5410418
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre02.g113752 3'UTR
Cre02.g113800 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGTTTCCACAACATCAAATGCCATGCCCAGCTTCCATGCCATGCCTAG
Internal bar code:CACACCGTTATGTCTCAACAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:289
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CATGCATATACCCCACCCCC
Suggested primer 2:GATTTCGCAACGAGGGATGC