Insertion junction: CLIP2.068547_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.068547
Chromosome:chromosome 14
Location:2637893
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g625400 RPT1 (1 of 1) K03061 - 26S proteasome regulatory subunit T1 (PSMC2, RPT1); 26S proteasome regulatory subunit 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTCCTCGCCCCCTATGTAGATGCTTGGATAGTGTTTATAACTCAAATT
Internal bar code:CTAAGATGTGTCGTCTACGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:3886
LEAP-Seq percent confirming:98.1132
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCGATCGCAAAACCAGTA
Suggested primer 2:CCCGTCCTCAGCCATACATC