Insertion junction: CLIP2.068558_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.068558
Chromosome:chromosome 3
Location:312400
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800285 (1 of 38) IPR002048//IPR011992 - EF-hand domain // EF-hand domain pair 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATTTTGCTTGCCGCCCATGCGTTTGTGGGGGGCAAAGCCAACGGAGCCA
Internal bar code:TTGCTTTGTATTGTTCAAGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1386
LEAP-Seq percent confirming:92.5
LEAP-Seq n confirming:74
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGATTCGGTGCGTTGTCT
Suggested primer 2:TGTCCGTCTTCCTGTTGTCG