Insertion junction: CLIP2.068574_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.068574
Chromosome:chromosome 12
Location:1580604
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g487250 (1 of 1) PF06454 - Protein of unknown function (DUF1084) (DUF1084) 3'UTR
Cre12.g801367 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTATGATTGTTAGCGACGTGCGGAAGTTAGCTGCTTTCCTTTACTCGGC
Internal bar code:CAAAGCCTTTTGCATAAAAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1314
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:ACCAGGAAGAAAGAGGCGTG
Suggested primer 2:GCGGGCATAAGTAGGAGGAC