Insertion junction: CLIP2.068574_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.068574
Chromosome:chromosome 12
Location:1580613
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g487250 (1 of 1) PF06454 - Protein of unknown function (DUF1084) (DUF1084) 3'UTR
Cre12.g801367 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAGAGACCTGTAAAACCATATGCTATTCTATTATTATTCTATACGTTTT
Internal bar code:GTCCGCGTGAGATGTATGAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3746
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGGCATAAGTAGGAGGAC
Suggested primer 2:ACCAGGAAGAAAGAGGCGTG