Insertion junction: CLIP2.068596_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.068596
Chromosome:chromosome 9
Location:965303
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g402700 (1 of 3) K12041 - solute carrier family 9 (sodium/hydrogen exchanger), member 6/7 (SLC9A6_7, NHE6_7) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCGCCCCCAGCAGCACCACACTGGTGGCGTCGTTGACGATGCCCTCCC
Internal bar code:GTAATTAGGCGAAGGTGGCTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:632
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCCCGTCATCTTCTACGC
Suggested primer 2:CACACACACACACACACACG