Insertion junction: CLIP2.068600_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.068600
Chromosome:chromosome 6
Location:7373511
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g300050 OPR27 OctotricoPeptide Repeat protein 27 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTTAATCTTCTCCAACACTACCAAACACGCACACATGTTTATCTCAAAA
Internal bar code:ATAATACAACTTCTTATTTGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:705
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTGTTTGCTGGTTGGGAA
Suggested primer 2:TTCTAGTGCCCGAGCCTAGT