Insertion junction: CLIP2.068606_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.068606
Chromosome:chromosome 10
Location:876491
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g423700 (1 of 1) PF07985 - SRR1 (SRR1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATCTAAACACAAGTCTTCAACTTGCATGCGTGCTGCCCCCATACATCG
Internal bar code:CGAGGGGCGACCGCGATCGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1830
LEAP-Seq percent confirming:52.7778
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:34
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:TAACAGAGGGAGGGACGGAG
Suggested primer 2:TAGCAACTGAGCTTGGGGTG