Insertion junction: CLIP2.068610_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.068610
Chromosome:chromosome 6
Location:2010675
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g265250 HTR12 Histone H3; (1 of 35) K11253 - histone H3 (H3) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGACAACAGATCCACACGCATTCAAATACATATCCTGTGCCGTTGCTTAG
Internal bar code:GTGGGTTATATTTGGCGAAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:4524
LEAP-Seq percent confirming:98.9796
LEAP-Seq n confirming:97
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:98

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGAGCAGCCACTCAGTCA
Suggested primer 2:TGGGAATTAGCTGCACCCTG