Insertion junction: CLIP2.068610_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.068610
Chromosome:chromosome 6
Location:2010677
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g265250 HTR12 Histone H3; (1 of 35) K11253 - histone H3 (H3) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTATCAGCATAGCGTGATGGACCTTTATCTCACGGGAAGGGTGCGGTT
Internal bar code:GTGGGTTATATTTGGCGAAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1792
LEAP-Seq percent confirming:47.3684
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGAATTAGCTGCACCCTG
Suggested primer 2:CTTGAGCAGCCACTCAGTCA