Insertion junction: CLIP2.068612_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.068612
Chromosome:chromosome 6
Location:7437173
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g300550 TIC100 (1 of 14) PF02493 - MORN repeat (MORN); 100 kDa subunit of translocon at the inner membrane of chloroplasts intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCGGCACGGCAGCGCGGGGCATGGGGCGTGCAAGCACTACAGCCGCGG
Internal bar code:AAGCCCCAATGAACTGCCGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2472
LEAP-Seq percent confirming:24.4444
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:34
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCTAAACCTCCACGGAAC
Suggested primer 2:ACATCCCCGAGATCCTGTGA