Insertion junction: CLIP2.068613_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.068613
Chromosome:chromosome 6
Location:540324
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g252401 NMDA1 (1 of 1) PTHR23291//PTHR23291:SF50 - BAX INHIBITOR-RELATED // PROTEIN LIFEGUARD 4; Conserved protein of unknown function CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGTGGGCAGCCACGAACGTCTTCACGGCTGTCGACGTGACGAAGGTCC
Internal bar code:CCACGGGGGCTATGTTGACATG

Confirmation - LEAP-Seq

LEAP-Seq distance:188
LEAP-Seq percent confirming:91.3043
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCGGAAACCTCAGTCTGG
Suggested primer 2:CTGGATGCGCATTACACAGC