Insertion junction: CLIP2.068616_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.068616
Chromosome:chromosome 6
Location:3146582
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g275700 HFO4,HFO3 (1 of 33) K11254 - histone H4 (H4); Histone H4 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGAGGAGCTCAGCGTCCGGTAGTCATGAAGCTGAAAGGCATTCAGCAT
Internal bar code:GCAGGGCGTTGTGATTGTCCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:104
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGCTCGTTGGGTTTGGTG
Suggested primer 2:ATTTGTACCCAGTGGCCCAG