Insertion junction: CLIP2.068619_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.068619
Chromosome:chromosome 13
Location:293103
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g801510 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAACACGATATCACAATTTTGACTTTGGCAGGCTCAGCGGCGTACCTG
Internal bar code:CTTAAATTAACCCCGGTGCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1319
LEAP-Seq percent confirming:94.5946
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGACCAGGTTCCACTCCT
Suggested primer 2:GAAGGCATTGTGCGGAAAGG