Insertion junction: CLIP2.068625_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.068625
Chromosome:chromosome 13
Location:4641502
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g603800 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACCAATGAGCGGGGAAACAGGCAGTGACGGAGTCTGGTGTGGACGGGCG
Internal bar code:AATCTTTTCTAATTGGAATTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3605
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:CTCAATGACGCATTCGCCAG
Suggested primer 2:GGACGCCGAAGTACTAGAGC