Insertion junction: CLIP2.068627_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.068627
Chromosome:chromosome 4
Location:3860375
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g230242 MOT40 (1 of 1) IPR007914//IPR015422 - Uncharacterised protein family UPF0193 // Pyridoxal phosphate-dependent transferase, major region, subdomain 2; Predicted protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCACCACACACCTCCTCGCTATGCCGGCTCCTGCCCCCGCGAGCTCAA
Internal bar code:CGTAGAGATTTCGCTGGCACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:594
LEAP-Seq percent confirming:76.1905
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CTCAAGCTGGAGACTGTGCA
Suggested primer 2:GACCTCCTTGATTGCTGGCT