Insertion junction: CLIP2.068627_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.068627
Chromosome:chromosome 4
Location:3860376
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g230242 MOT40 (1 of 1) IPR007914//IPR015422 - Uncharacterised protein family UPF0193 // Pyridoxal phosphate-dependent transferase, major region, subdomain 2; Predicted protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTCAGGGTTTGATGCTACCGTAATCAGGGTCATCAACAGGCAGCTGCC
Internal bar code:CGTAGAGATTTCGCTGGCACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:652
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GACCTCCTTGATTGCTGGCT
Suggested primer 2:CTCAAGCTGGAGACTGTGCA