Insertion junction: CLIP2.068628_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.068628
Chromosome:chromosome 2
Location:6161908
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g119900 PCP1,CEP6 (1 of 1) PTHR12411//PTHR12411:SF332 - CYSTEINE PROTEASE FAMILY C1-RELATED // SUBFAMILY NOT NAMED; Cysteine endopeptidase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCACACAGCACGTCTGCTGGCTACCTCCAGAGAGCCAGCCGCATGATCA
Internal bar code:GCTATCGGTTATCGCTGACTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:265
LEAP-Seq percent confirming:14.2857
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTGCGCCTACACTCTTGT
Suggested primer 2:AATGCCAGGAAGATGGTGGG