Insertion junction: CLIP2.068633_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.068633
Chromosome:plastome
Location:76695
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802295 ChreCp030,psbN,2717031 photosystem II protein N; (1 of 1) K02715 - PsbN protein (psbN) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCAGTTACACTTAACAGAAGAAACCATAAAAAAAAGGTAAAGAAAAAA
Internal bar code:TGTTTCTGTCTTTTGACAGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:293
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGGCAGTCCCTTTTCCCC
Suggested primer 2:GTAAACCCCTTCCCCTTCGG