Insertion junction: CLIP2.068641_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.068641
Chromosome:chromosome 16
Location:5863862
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g679600 (1 of 1) K11092 - U2 small nuclear ribonucleoprotein A' (SNRPA1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGTGCACAACGTTGGGCAACCGTGTATGGACCACGGGCTGCGTTGAGT
Internal bar code:GAGGGCATATACTAGACGAAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2840
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:69
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCTTTCTCTTTAGCTCGC
Suggested primer 2:GACTGGTTTGGAGGAGGTGG